Transparent Growth Measurement (NPS)

GA4’s New Users and Google Search Console Click: Difference, How to Read, When to refer

Contributors: Amol Ghemud ABCD
Published: November 7, 2024

Summary

For SEO reporting, GSC should be used as the primary source for search performance metrics (impressions, clicks, CTR), while GA4 should be leveraged for on-site engagement and user interaction insights. Align both data sets with complementary metrics like conversion rates and organic traffic trends to provide a comprehensive view of SEO efforts.

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Marketers often struggle when comparing numbers between GA4 and GSC. At first glance, both platforms appear to report on similar metrics, yet the results typically don’t align. This mismatch creates confusion, especially when stakeholders expect a single version of the truth in SEO reporting.

The core reason lies in the way these tools are built. GA4 measures user behaviour across every channel: organic, paid, social, and direct, while GSC focuses purely on organic search performance. Understanding the intent behind each tool enables you to extract the right insights, present clearer reports, and avoid drawing incorrect conclusions in 2025.

GA4 New Users vs. GSC Clicks

GA4 New Users represent the number of first-time visitors to your site during a selected timeframe. GA4 identifies these users through cookies or user IDs. This means if someone clears cookies or switches devices, they may be counted as new again. GA4’s strength lies in providing a holistic picture of all user interactions, including organic, paid, referral, social, and direct. Its tracking is powered by the analytics tag on your website, which captures detailed behaviour once the visitor lands.

GSC Clicks, on the other hand, captures the number of times someone clicks your website link from Google Search. Unlike GA4, it doesn’t track what users do afterwards, it only measures search performance. The dataset comes directly from Google’s search index and includes only organic traffic.

These numbers will rarely match because GA4 is user-focused across multiple channels, while GSC is search-specific and click-based.

Should GA4 and GSC Match?

The short answer is no. GA4 new users and GSC clicks don’t align because they measure different touchpoints. GSC captures every valid click in the SERP, while GA4 may filter, reclassify, or miss some traffic due to cookie resets, device switches, or sampling. In practice, marketers should avoid comparing them one-to-one and instead align them to answer specific questions.

How Do You Track User Interactions in GA4 and GSC?

Even though both tools serve different purposes, aligning specific metrics can give deeper insights:

  • Organic traffic segmentation in GA4 helps you isolate users who came to your site via search.
  • Clicks in GSC vs. click events in GA4 indicate how many search visitors transitioned into actual site interactions.
  • CTR in GSC vs. bounce rate in GA4 uncovers whether search snippets are attracting the right traffic.
  • Impressions in GSC vs. new users in GA4 show how well your site is being discovered and how much of that discovery translates into fresh visitors.

This alignment provides a more realistic picture of SEO performance than treating the two reports as interchangeable.

How To Collect and Compare Reporting From GA4 and GSC ?

First, filter the traffic source to ‘organic’ in GA4 from the default ‘all channels‘ view. This allows for a direct comparison with GSC, which only includes organic search results, whereas GA4 reports on all channels by default.

  1. The default report view in GA4 provides a comprehensive overview of all users (organic, direct, referral, paid ) interacting with the website, regardless of their originating channels.
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Source: GA4สล็อตjoker123สล็อตเว็บตรง

  1. Filtered report of organic traffic, selectable via the “Add comparison” feature.
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Source: GA4เว็บสล็อตเว็บตรงสล็อตเว็บตรง

Since New Users in GA4 refers to unique first-time visitors, it should not be directly compared to Clicks (the number of times your site’s link is clicked from Google search results) in GSC.

Using sessions from organic traffic in GA4 to compare with clicks in GSC can directly measure the effectiveness of organic search traffic. A session in GA4 represents a group of user interactions with your website within a given timeframe. 

Components of sessions include pageviews (each time a page is loaded), e-commerce transactions (purchases made on your site), and events (user interactions like clicks, form submissions, etc.). Therefore, click events from organic sessions in GA4 can be compared with clicks in GSC.

  1. Traffic acquisition (Session)  reporting for the organic channel, by default, includes “All events”.
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Source: GA4สล็อต pg

  1. Traffic acquisition (Session)  reporting for the organic channel, filtered to “Click events”.
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Source: GA4

  1. The default view of the GSC performance report for search results displays total clicks, impressions, CTR, and average organic position.
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Source: GSC

However, discrepancies between GA4 organic click (~12K) events and GSC clicks (~35K) can still be observed.

Why the Discrepancy Persists?

Several factors explain the gap between GA4 and GSC data:

  • Click recording methods → GA4 counts after the tag fires, GSC counts at the SERP level.
  • Session handling → GA4 groups interactions into sessions, GSC does not.
  • Tracking methods → GA4 relies on cookies/JavaScript; GSC pulls directly from Google search logs.
  • Cross-device activity → the same person may appear as multiple “new users” in GA4.
  • Bot filtering → GA4 and GSC apply different filters.
  • Data sampling → GA4 may sample large datasets, whereas GSC is generally not sampled.

Understanding these differences saves you from chasing “missing traffic” and helps you present reports with confidence.

Learn More About the Data mismatch between GA4 and Google Search Console

How to Align Data for Better SEO Insights?

  • Use GSC for granular search performance: impressions, clicks, rankings.
  • Use GA4 for post-click engagement: sessions, conversions, and user flows.
  • Bring both together to map the journey, how discovery in search translates into valuable actions on-site.

In 2025, with Google’s AI Overviews and LLM-powered search results, this alignment is even more critical. Structured comparisons help you answer AI-driven queries (such as “GA4 vs GSC differences”) while also preparing you for SERP features, where concise and accurate data wins visibility.

Conclusion: Should GSC or GA4 Be Your Source of Truth?

The answer isn’t one or the other, it’s both. GSC is your authority for search visibility and performance, while GA4 tells the story of what happens after visitors land. Together, they provide the whole SEO picture: who is discovering you, how they engage, and whether they convert.

If you rely on just one, you risk reporting blind spots. But when you align GA4 and GSC insights, you can confidently show the impact of your SEO efforts from impression to conversion.


Want to Make Sense of your GA4 and GSC Data and Boost your SEO Performance? 

upGrowth helps businesses integrate analytics insights, optimise SEO reporting, and turn data into actionable strategies.

Connect with upGrowth today to enhance your search visibility and gain insight into how your users interact with your site.


Watch: GA4 New Users vs Google Search Console Clicks Explained

FAQs: GA4 vs GSC

1. How do I link Google Search Console with GA4?

You can link GSC with GA4 to get a complete view of search performance and user behavior. This integration allows you to see which search queries drive traffic, track clicks, and analyze user engagement on your site.

2. What are the steps to integrate GSC data into Google Analytics?

First, verify your website in GSC. Then, in GA4, navigate to Admin → Product Links → Search Console. Follow the prompts to link your property and select the views you want to connect. Once linked, GA4 can display organic search metrics alongside on-site engagement.

3. What are the benefits of connecting GA4 and GSC?

Integrating GA4 and GSC helps you understand both search visibility and user behavior, optimize content for better rankings, track organic traffic more accurately, and identify opportunities for improving engagement and conversions.

4. How do GA4 new users differ from GSC clicks?

GA4 New Users measures unique first-time visitors to your site, while GSC Clicks tracks how many times your link was clicked from Google Search results. The metrics may differ because GA4 includes all channels and user sessions, whereas GSC focuses only on search traffic.

5. How can I use GA4 and GSC together to improve SEO reporting?

By aligning organic traffic in GA4 with GSC clicks and impressions, you can analyze which keywords bring valuable traffic, identify high-performing pages, monitor CTR versus bounce rate, and make data-driven content optimization decisions.

For Curious Minds

The core reason for the discrepancy is that GA4 and GSC are designed to measure completely different stages of the user journey. GA4 is an on-site analytics tool tracking user behavior across all channels, while GSC is a pre-click tool focused exclusively on your site's performance in Google's organic search results. This architectural separation means they will never align perfectly. Your GA4 data is collected via a website tag that fires once a user lands on your page, capturing detailed interactions like sessions and pageviews. It identifies users with cookies or user IDs, which can be affected by browser settings or device switching. In contrast, GSC data comes directly from Google’s search logs, counting every valid click on your link from the SERP. Because GSC measures the click and GA4 measures the subsequent visit, factors like page load failures, tracking blockers, or data sampling in GA4 create a natural gap. Understanding this distinction is the first step to using both tools effectively for analysis.

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About the Author

amol
Optimizer in Chief

Amol has helped catalyse business growth with his strategic & data-driven methodologies. With a decade of experience in the field of marketing, he has donned multiple hats, from channel optimization, data analytics and creative brand positioning to growth engineering and sales.

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